Business Details
42 Years
experience
Award-Winning Boothbay Harbor Hotel Deals
At Flagship Inn & Suites, we prioritize comfort and affordability while delivering exceptional hospitality to guests visiting Boothbay Harbor, Maine. With over 40 years of dedication to hospitality since 1984, our family-owned hotel combines personalized service with modern amenities to create a welcoming home-away-from-home experience. Our seasoned staff, many with 15-20 years of tenure, ensures guests receive attentive care and insider knowledge of local attractions, from the Coastal Maine Botanical Gardens to LobsterFest. Strategically located just 0.6 miles from Boothbay Harbor's downtown, we offer easy access to coastal activities while maintaining a peaceful setting adjacent to Penny Lake Preserve's walking trails. Recognized for rigorous hospitality standards through certifications like AAA 2-Diamond and TripAdvisor's Certificate of Excellence, we also champion environmental stewardship with solar energy, water conservation, and eco-friendly practices.Our 80+ rooms include family suites, ADA-compliant options, and pet-friendly accommodations equipped with premium amenities like a heated outdoor pool and complimentary breakfast. As a multi-award-winning property featured in Downeast Dog News Magazine for Best Pet-Friendly Hotel, we guarantee memorable stays through thoughtful touches like daily fresh-baked cookies and curated local experiences. Our commitment to transparency, value, and guest satisfaction has earned us loyal repeat visitors and consistently positive reviews across third-party platforms.
Services
Rooms
Suites
Pet Friendly
Gift Certificates
Special Packages
Details
- Year established: 1984
Highlights and features
- We've served guests since 1984 with consistent hospitality excellence.
- Our staff maintains 15-20 years of tenure for personalized service.
- Pet-friendly rooms include specialized amenities for four-legged guests.
- Central location provides walkable access to coastal attractions.
- Eco-certified operations reduce environmental impact through solar energy.
Associations and certifications
- AAA
- TripAdvisor
- Platinum Green Leader on TripAdvisor
- Downeast Dog News Magazine
What people say
Clean and neat property
Super friendly staff
Complimentary breakfast was great
Pet-friendly rooms with treats
Heated salt water pool
Services
Rooms
Our 80+ renovated rooms feature comfortable bedding, cable TV with HBO, and mini-fridges across premium king and double configurations. Newly upgraded bathrooms include walk-in showers for modern convenience. Guests enjoy complimentary breakfast and access to outdoor amenities like our heated saltwater pool.
Suites
Spacious two-room suites accommodate up to six guests with separate king and double bedrooms plus dual bathrooms. Ideal for families or groups seeking extra space while maintaining easy access to recreational facilities including playgrounds and walking trails.
Pet Friendly
Pet-friendly rooms feature durable flooring and specialized amenities for dogs, including treats and toys. Adjacent Penny Lake Preserve provides walking trails. Two Salty Dogs Pet Outfitters partnership ensures pet supplies availability. Pet fee applies with specific policies available upon booking.
Gift Certificates
Flexible gift certificates apply toward rooms, suites, or special packages. Ideal for holidays, anniversaries, or corporate gifting with customizable denominations. Available through direct bookings and redeemable during Gardens Aglow events at Coastal Maine Botanical Gardens.
Special Packages
Seasonal promotions include discounted rates during Gardens Aglow runs and winter stays. Packages combine lodging with local experiences like dining reservations. Best rates guaranteed when booked directly through our website or phone line.
Questions
Do you allow pets in all rooms?
Pets are welcome in designated pet-friendly rooms featuring durable flooring. Specific policies apply, including weight limits and cleaning fees. Treats and toys provided for guests' convenience.
What amenities come with my room?
All rooms include cable TV with HBO, mini-fridges, and complimentary breakfast. Pool access, playgrounds, and walking trails available. Family suites offer additional space and dual bathrooms.
How close are you to Boothbay Harbor downtown?
Our property sits 0.6 miles from downtown Boothbay Harbor. Walking trails connect to Penny Lake Preserve, or guests may utilize our trolley line for convenient transportation.
Can I get special pricing for extended stays?
Winter and off-season packages provide discounted rates for extended visits. Contact our front desk directly to customize multi-week booking arrangements with personalized amenities.
Are there eco-friendly practices at your hotel?
We implement solar energy systems, water-conserving fixtures, and chemical-free pool sanitization. Recycle programs for multiple materials and use eco-friendly cleaning products in all guest areas.
Do you offer accessible accommodations?
ADA-compliant double rooms feature wheelchair-accessible layouts. Ground-floor locations with walk-in showers available. Contact reservations team to confirm specific accessibility requirements before booking.